Genome Details
Selected Rep_genome_ID: HRGMv2_4553
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_4553 | 3,708,458 | 98.99% | 0% | Tanzania | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_4553_CGC6 | CGCFAM_00003 | Yes | 5 | 2 | |
| HRGMv2_4553_CGC39 | CGCFAM_01591 | Yes | 5 | 1 | |
| HRGMv2_4553_CGC27 | CGCFAM_02661 | Yes | 11 | 3 | |
| HRGMv2_4553_CGC8 | CGCFAM_03522 | Yes | 6 | 2 | |
| HRGMv2_4553_CGC2 | CGCFAM_04665 | Yes | 5 | 2 | |
| HRGMv2_4553_CGC16 | CGCFAM_05066 | Yes | 3 | 1 | |
| HRGMv2_4553_CGC21 | CGCFAM_05413 | Yes | 6 | 2 | |
| HRGMv2_4553_CGC3 | CGCFAM_06054 | Yes | 5 | 1 | |
| HRGMv2_4553_CGC20 | CGCFAM_07682 | Yes | 3 | 1 | |
| HRGMv2_4553_CGC23 | CGCFAM_07872 | Yes | 3 | 1 |
Top CAZyme Families