Cluster: HRGMv2_4553_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4553
- CGC Family ID: CGCFAM_06054
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4553_2 | HRGMv2_4553_2_61 | 62640 | 64076 | - | 2.A.38.1.1 |
| TC | HRGMv2_4553_2 | HRGMv2_4553_2_62 | 64097 | 65455 | - | 2.A.38.1.1 |
| NULL(UNKNOWN) | HRGMv2_4553_2 | HRGMv2_4553_2_63 | 65736 | 65978 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4553_2 | HRGMv2_4553_2_64 | 65975 | 66640 | - | Hydrolase | HAD_2 |
| CAZyme | HRGMv2_4553_2 | HRGMv2_4553_2_65 | 66944 | 68398 | - | GT5 |
Gene ID: HRGMv2_4553_2_61
Type: TC
Location: 62640 - 64076 (-)
Type: TC
Location: 62640 - 64076 (-)
Gene ID: HRGMv2_4553_2_62
Type: TC
Location: 64097 - 65455 (-)
Type: TC
Location: 64097 - 65455 (-)
Gene ID: HRGMv2_4553_2_63
Type:
Location: 65736 - 65978 (-)
Type:
Location: 65736 - 65978 (-)
Gene ID: HRGMv2_4553_2_64
Type: pfam
Location: 65975 - 66640 (-)
Type: pfam
Location: 65975 - 66640 (-)
Gene ID: HRGMv2_4553_2_65
Type: CAZyme
Location: 66944 - 68398 (-)
Type: CAZyme
Location: 66944 - 68398 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.