Cluster: HRGMv2_4553_CGC20
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4553
- CGC Family ID: CGCFAM_07682
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4553_21 | HRGMv2_4553_21_35 | 31814 | 34516 | + | GH9 |
| NULL(UNKNOWN) | HRGMv2_4553_21 | HRGMv2_4553_21_36 | 34778 | 34951 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4553_21 | HRGMv2_4553_21_37 | 34976 | 35683 | - | 9.B.100.1.1 |
Gene ID: HRGMv2_4553_21_35
Type: CAZyme
Location: 31814 - 34516 (+)
Type: CAZyme
Location: 31814 - 34516 (+)
Gene ID: HRGMv2_4553_21_36
Type:
Location: 34778 - 34951 (-)
Type:
Location: 34778 - 34951 (-)
Gene ID: HRGMv2_4553_21_37
Type: TC
Location: 34976 - 35683 (-)
Type: TC
Location: 34976 - 35683 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.