Cluster: HRGMv2_4553_CGC39
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4553
- CGC Family ID: CGCFAM_01591
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4553_144 | HRGMv2_4553_144_1 | 63 | 1040 | - | 8.A.21.2.2 |
| pfam | HRGMv2_4553_144 | HRGMv2_4553_144_2 | 1087 | 1521 | - | NfeD |
| CAZyme | HRGMv2_4553_144 | HRGMv2_4553_144_3 | 1648 | 2769 | - | GH105 |
| TC | HRGMv2_4553_144 | HRGMv2_4553_144_4 | 2766 | 3593 | - | 3.A.1.1.11 |
| TC | HRGMv2_4553_144 | HRGMv2_4553_144_5 | 3590 | 4468 | - | 3.A.1.1.11 |
Gene ID: HRGMv2_4553_144_1
Type: TC
Location: 63 - 1040 (-)
Type: TC
Location: 63 - 1040 (-)
Gene ID: HRGMv2_4553_144_2
Type: pfam
Location: 1087 - 1521 (-)
Type: pfam
Location: 1087 - 1521 (-)
Gene ID: HRGMv2_4553_144_3
Type: CAZyme
Location: 1648 - 2769 (-)
Type: CAZyme
Location: 1648 - 2769 (-)
Gene ID: HRGMv2_4553_144_4
Type: TC
Location: 2766 - 3593 (-)
Type: TC
Location: 2766 - 3593 (-)
Gene ID: HRGMv2_4553_144_5
Type: TC
Location: 3590 - 4468 (-)
Type: TC
Location: 3590 - 4468 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.