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Genome Details

Selected Rep_genome_ID: HRGMv2_3896
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
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Family
Bacteroidaceae
→
Genus
Prevotella
→
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_3896 3,459,180 97.59% 0.929% UK Europe HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_3896_CGC10 CGCFAM_00001 Yes 6 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_3896_CGC2 CGCFAM_00001 Yes 4 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_3896_CGC22 CGCFAM_00001 Yes 4 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_3896_CGC27 CGCFAM_00001 Yes 10 5 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_3896_CGC47 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_3896_CGC25 CGCFAM_00030 Yes 4 1
HRGMv2_3896_CGC44 CGCFAM_00031 Yes 4 1 pectin/galactan
HRGMv2_3896_CGC3 CGCFAM_00044 Yes 7 4 beta-mannan/xylan/beta-glucan
HRGMv2_3896_CGC40 CGCFAM_00108 Yes 9 5 pectin
HRGMv2_3896_CGC6 CGCFAM_00118 Yes 5 2
HRGMv2_3896_CGC16 CGCFAM_00296 Yes 7 3
HRGMv2_3896_CGC8 CGCFAM_00440 Yes 5 3
HRGMv2_3896_CGC32 CGCFAM_00513 Yes 9 4
HRGMv2_3896_CGC1 CGCFAM_00644 Yes 3 1
HRGMv2_3896_CGC20 CGCFAM_00727 Yes 3 1
HRGMv2_3896_CGC12 CGCFAM_00862 Yes 15 5
HRGMv2_3896_CGC24 CGCFAM_01251 Yes 6 3
HRGMv2_3896_CGC15 CGCFAM_01540 Yes 5 1
HRGMv2_3896_CGC33 CGCFAM_02375 Yes 7 3
HRGMv2_3896_CGC11 CGCFAM_02937 Yes 10 4
HRGMv2_3896_CGC48 CGCFAM_03760 Yes 4 1
HRGMv2_3896_CGC41 CGCFAM_04192 Yes 3 2
HRGMv2_3896_CGC7 CGCFAM_04564 Yes 3 1
HRGMv2_3896_CGC17 CGCFAM_05443 Yes 3 1
HRGMv2_3896_CGC26 CGCFAM_06010 Yes 5 2
Top CAZyme Families