Genome Details
Selected Rep_genome_ID: HRGMv2_3815
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Winkia
Species
Winkia neuii
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3815 | 2,260,662 | 100% | 0.947% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3815_CGC20 | CGCFAM_00074 | Yes | 5 | 2 | |
| HRGMv2_3815_CGC18 | CGCFAM_00295 | Yes | 5 | 1 | |
| HRGMv2_3815_CGC22 | CGCFAM_00534 | Yes | 5 | 2 | beta-glucan |
| HRGMv2_3815_CGC27 | CGCFAM_00687 | Yes | 7 | 1 | |
| HRGMv2_3815_CGC25 | CGCFAM_00691 | Yes | 9 | 3 | |
| HRGMv2_3815_CGC2 | CGCFAM_00711 | Yes | 7 | 3 | |
| HRGMv2_3815_CGC12 | CGCFAM_01642 | Yes | 3 | 1 | |
| HRGMv2_3815_CGC13 | CGCFAM_02125 | Yes | 4 | 1 | |
| HRGMv2_3815_CGC24 | CGCFAM_02763 | Yes | 8 | 2 | |
| HRGMv2_3815_CGC5 | CGCFAM_05116 | Yes | 6 | 1 | |
| HRGMv2_3815_CGC7 | CGCFAM_05243 | Yes | 4 | 1 | |
| HRGMv2_3815_CGC9 | CGCFAM_07702 | Yes | 10 | 2 | |
| HRGMv2_3815_CGC15 | CGCFAM_10461 | Yes | 10 | 1 | |
| HRGMv2_3815_CGC17 | CGCFAM_10462 | Yes | 5 | 1 | |
| HRGMv2_3815_CGC21 | CGCFAM_10463 | Yes | 7 | 3 | |
| HRGMv2_3815_CGC23 | CGCFAM_10464 | Yes | 11 | 4 |
Top CAZyme Families