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Cluster: HRGMv2_3815_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3815_13 HRGMv2_3815_13_20 26198 27595 + 2.A.1.3.37
pfam HRGMv2_3815_13 HRGMv2_3815_13_21 27817 28971 - ROK | ROK
TC HRGMv2_3815_13 HRGMv2_3815_13_22 29089 30033 + 3.A.1.1.20
NULL(UNKNOWN) HRGMv2_3815_13 HRGMv2_3815_13_23 30039 30152 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3815_13 HRGMv2_3815_13_24 30250 30921 + 3.A.1.1.36
STP HRGMv2_3815_13 HRGMv2_3815_13_25 31026 32381 + SBP_bac_1
CAZyme HRGMv2_3815_13 HRGMv2_3815_13_26 32510 34162 + GH36
CAZyme HRGMv2_3815_13 HRGMv2_3815_13_27 34516 35877 + CE1
CAZyme HRGMv2_3815_13 HRGMv2_3815_13_28 36131 39394 - GH20
Gene ID: HRGMv2_3815_13_20
Type: TC
Location: 26198 - 27595 (+)
Gene ID: HRGMv2_3815_13_21
Type: pfam
Location: 27817 - 28971 (-)
Gene ID: HRGMv2_3815_13_22
Type: TC
Location: 29089 - 30033 (+)
Gene ID: HRGMv2_3815_13_23
Type:
Location: 30039 - 30152 (+)
Gene ID: HRGMv2_3815_13_24
Type: TC
Location: 30250 - 30921 (+)
Gene ID: HRGMv2_3815_13_25
Type: STP
Location: 31026 - 32381 (+)
Gene ID: HRGMv2_3815_13_26
Type: CAZyme
Location: 32510 - 34162 (+)
Gene ID: HRGMv2_3815_13_27
Type: CAZyme
Location: 34516 - 35877 (+)
Gene ID: HRGMv2_3815_13_28
Type: CAZyme
Location: 36131 - 39394 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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