dbCAN Logo

Cluster: HRGMv2_3815_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3815_3 HRGMv2_3815_3_194 209626 210105 - 1.E.34.1.4
TC HRGMv2_3815_3 HRGMv2_3815_3_195 210215 212770 - 3.A.1.125.3
TC HRGMv2_3815_3 HRGMv2_3815_3_196 212770 213825 - 3.A.1.125.3
pfam HRGMv2_3815_3 HRGMv2_3815_3_197 213974 214456 - GSHPx | AhpC-TSA
NULL(UNKNOWN) HRGMv2_3815_3 HRGMv2_3815_3_198 214882 215175 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3815_3 HRGMv2_3815_3_199 215153 216397 - GH32
STP HRGMv2_3815_3 HRGMv2_3815_3_200 216497 217870 - SBP_bac_1
TC HRGMv2_3815_3 HRGMv2_3815_3_201 217884 218837 - 3.A.1.1.36
TC HRGMv2_3815_3 HRGMv2_3815_3_202 218846 219748 - 3.A.1.1.25
CAZyme HRGMv2_3815_3 HRGMv2_3815_3_203 219756 221885 - GH36
Gene ID: HRGMv2_3815_3_194
Type: TC
Location: 209626 - 210105 (-)
Gene ID: HRGMv2_3815_3_195
Type: TC
Location: 210215 - 212770 (-)
Gene ID: HRGMv2_3815_3_196
Type: TC
Location: 212770 - 213825 (-)
Gene ID: HRGMv2_3815_3_197
Type: pfam
Location: 213974 - 214456 (-)
Gene ID: HRGMv2_3815_3_198
Type:
Location: 214882 - 215175 (-)
Gene ID: HRGMv2_3815_3_199
Type: CAZyme
Location: 215153 - 216397 (-)
Gene ID: HRGMv2_3815_3_200
Type: STP
Location: 216497 - 217870 (-)
Gene ID: HRGMv2_3815_3_201
Type: TC
Location: 217884 - 218837 (-)
Gene ID: HRGMv2_3815_3_202
Type: TC
Location: 218846 - 219748 (-)
Gene ID: HRGMv2_3815_3_203
Type: CAZyme
Location: 219756 - 221885 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List