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Cluster: HRGMv2_3815_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3815_7 HRGMv2_3815_7_41 38813 40723 - 3.A.1.135.6
TC HRGMv2_3815_7 HRGMv2_3815_7_42 40720 42480 - 3.A.1.135.7
pfam HRGMv2_3815_7 HRGMv2_3815_7_43 42574 43479 + Lipase_GDSL | Lipase_GDSL_2
TC HRGMv2_3815_7 HRGMv2_3815_7_44 43521 45089 + 2.A.81.1.3
peptidase HRGMv2_3815_7 HRGMv2_3815_7_45 45086 46318 - M18.UPW
pfam HRGMv2_3815_7 HRGMv2_3815_7_46 46389 46838 + OsmC
CAZyme HRGMv2_3815_7 HRGMv2_3815_7_47 46912 47508 - AA6
TF HRGMv2_3815_7 HRGMv2_3815_7_48 47714 48175 + MarR
pfam HRGMv2_3815_7 HRGMv2_3815_7_49 48172 48612 - Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
TC HRGMv2_3815_7 HRGMv2_3815_7_50 48862 50724 + 1.A.33.1.4
Gene ID: HRGMv2_3815_7_41
Type: TC
Location: 38813 - 40723 (-)
Gene ID: HRGMv2_3815_7_42
Type: TC
Location: 40720 - 42480 (-)
Gene ID: HRGMv2_3815_7_43
Type: pfam
Location: 42574 - 43479 (+)
Gene ID: HRGMv2_3815_7_44
Type: TC
Location: 43521 - 45089 (+)
Gene ID: HRGMv2_3815_7_45
Type: peptidase
Location: 45086 - 46318 (-)
Gene ID: HRGMv2_3815_7_46
Type: pfam
Location: 46389 - 46838 (+)
Gene ID: HRGMv2_3815_7_47
Type: CAZyme
Location: 46912 - 47508 (-)
Gene ID: HRGMv2_3815_7_48
Type: TF
Location: 47714 - 48175 (+)
Gene ID: HRGMv2_3815_7_49
Type: pfam
Location: 48172 - 48612 (-)
Gene ID: HRGMv2_3815_7_50
Type: TC
Location: 48862 - 50724 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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