dbCAN Logo

Cluster: HRGMv2_3815_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3815_12 HRGMv2_3815_12_18 18940 20457 + 2.A.1.3.49
pfam HRGMv2_3815_12 HRGMv2_3815_12_19 20519 21895 - Aldedh
peptidase HRGMv2_3815_12 HRGMv2_3815_12_20 22089 23072 + S41.UNA
TC HRGMv2_3815_12 HRGMv2_3815_12_21 23069 23944 - 3.A.1.1.36
TC HRGMv2_3815_12 HRGMv2_3815_12_22 23941 24861 - 3.A.1.1.7
STP HRGMv2_3815_12 HRGMv2_3815_12_23 24881 26191 - SBP_bac_1
CAZyme HRGMv2_3815_12 HRGMv2_3815_12_24 26210 27481 - GH20
CAZyme HRGMv2_3815_12 HRGMv2_3815_12_25 27478 28608 - GH5_18
CAZyme HRGMv2_3815_12 HRGMv2_3815_12_26 28626 31622 - GH38
TF HRGMv2_3815_12 HRGMv2_3815_12_27 31803 32798 + LacI
CAZyme HRGMv2_3815_12 HRGMv2_3815_12_28 32782 34140 - GH18
Gene ID: HRGMv2_3815_12_18
Type: TC
Location: 18940 - 20457 (+)
Gene ID: HRGMv2_3815_12_19
Type: pfam
Location: 20519 - 21895 (-)
Gene ID: HRGMv2_3815_12_20
Type: peptidase
Location: 22089 - 23072 (+)
Gene ID: HRGMv2_3815_12_21
Type: TC
Location: 23069 - 23944 (-)
Gene ID: HRGMv2_3815_12_22
Type: TC
Location: 23941 - 24861 (-)
Gene ID: HRGMv2_3815_12_23
Type: STP
Location: 24881 - 26191 (-)
Gene ID: HRGMv2_3815_12_24
Type: CAZyme
Location: 26210 - 27481 (-)
Gene ID: HRGMv2_3815_12_25
Type: CAZyme
Location: 27478 - 28608 (-)
Gene ID: HRGMv2_3815_12_26
Type: CAZyme
Location: 28626 - 31622 (-)
Gene ID: HRGMv2_3815_12_27
Type: TF
Location: 31803 - 32798 (+)
Gene ID: HRGMv2_3815_12_28
Type: CAZyme
Location: 32782 - 34140 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List