Genome Details
Selected Rep_genome_ID: HRGMv2_3169
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp944385175
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3169 | 2,629,224 | 95.63% | 0.671% | South Korea | Asia | HRGM |
| Rep_3302 | 2,578,698 | 95.5339% | 1.00671% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3169_CGC14 | CGCFAM_00559 | Yes | 4 | 1 | |
| HRGMv2_3169_CGC15 | CGCFAM_00591 | Yes | 6 | 2 | |
| HRGMv2_3169_CGC10 | CGCFAM_00768 | Yes | 9 | 2 | |
| HRGMv2_3169_CGC12 | CGCFAM_06189 | Yes | 5 | 1 | |
| HRGMv2_3169_CGC1 | CGCFAM_06190 | Yes | 9 | 4 | |
| HRGMv2_3169_CGC13 | CGCFAM_06191 | Yes | 8 | 3 | |
| HRGMv2_3169_CGC18 | CGCFAM_06192 | Yes | 12 | 1 | |
| HRGMv2_3169_CGC7 | CGCFAM_10267 | Yes | 7 | 1 | |
| HRGMv2_3169_CGC3 | CGCFAM_10316 | Yes | 5 | 1 |
Top CAZyme Families