Cluster: HRGMv2_3169_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3169
- CGC Family ID: CGCFAM_00559
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3169_10 | HRGMv2_3169_10_67 | 71717 | 72760 | - | GT2 |
| pfam | HRGMv2_3169_10 | HRGMv2_3169_10_68 | 72774 | 73448 | - | DUF2461 |
| TC | HRGMv2_3169_10 | HRGMv2_3169_10_69 | 73627 | 74991 | + | 2.A.38.1.1 |
| TC | HRGMv2_3169_10 | HRGMv2_3169_10_70 | 74988 | 76424 | + | 2.A.38.1.3 |
Gene ID: HRGMv2_3169_10_67
Type: CAZyme
Location: 71717 - 72760 (-)
Type: CAZyme
Location: 71717 - 72760 (-)
Gene ID: HRGMv2_3169_10_68
Type: pfam
Location: 72774 - 73448 (-)
Type: pfam
Location: 72774 - 73448 (-)
Gene ID: HRGMv2_3169_10_69
Type: TC
Location: 73627 - 74991 (+)
Type: TC
Location: 73627 - 74991 (+)
Gene ID: HRGMv2_3169_10_70
Type: TC
Location: 74988 - 76424 (+)
Type: TC
Location: 74988 - 76424 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Limivicinus
Species
Limivicinus sp944385175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.