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Cluster: HRGMv2_3169_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3169_7 HRGMv2_3169_7_62 70648 71715 + 3.A.1.2.12
NULL(UNKNOWN) HRGMv2_3169_7 HRGMv2_3169_7_63 71943 73127 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3169_7 HRGMv2_3169_7_64 73169 74710 + 3.A.1.2.12
TC HRGMv2_3169_7 HRGMv2_3169_7_65 74703 75824 + 3.A.1.2.10
TC HRGMv2_3169_7 HRGMv2_3169_7_66 75821 76765 + 3.A.1.2.17
pfam HRGMv2_3169_7 HRGMv2_3169_7_67 76841 77752 + Indigoidine_A
CAZyme HRGMv2_3169_7 HRGMv2_3169_7_68 77924 78907 + GT2
CAZyme HRGMv2_3169_7 HRGMv2_3169_7_69 78938 79915 + GT2
TC HRGMv2_3169_7 HRGMv2_3169_7_70 79919 81376 + 2.A.66.2.23
Gene ID: HRGMv2_3169_7_62
Type: TC
Location: 70648 - 71715 (+)
Gene ID: HRGMv2_3169_7_63
Type:
Location: 71943 - 73127 (+)
Gene ID: HRGMv2_3169_7_64
Type: TC
Location: 73169 - 74710 (+)
Gene ID: HRGMv2_3169_7_65
Type: TC
Location: 74703 - 75824 (+)
Gene ID: HRGMv2_3169_7_66
Type: TC
Location: 75821 - 76765 (+)
Gene ID: HRGMv2_3169_7_67
Type: pfam
Location: 76841 - 77752 (+)
Gene ID: HRGMv2_3169_7_68
Type: CAZyme
Location: 77924 - 78907 (+)
Gene ID: HRGMv2_3169_7_69
Type: CAZyme
Location: 78938 - 79915 (+)
Gene ID: HRGMv2_3169_7_70
Type: TC
Location: 79919 - 81376 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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