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Cluster: HRGMv2_3169_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3169_9 HRGMv2_3169_9_83 71805 72545 - 3.A.1.3.20
TC HRGMv2_3169_9 HRGMv2_3169_9_84 72556 73686 - 3.A.1.3.20
TC HRGMv2_3169_9 HRGMv2_3169_9_85 73743 74630 - 3.A.1.3.27
TC HRGMv2_3169_9 HRGMv2_3169_9_86 75166 76494 + 2.A.38.4.1
TC HRGMv2_3169_9 HRGMv2_3169_9_87 76539 77186 + 2.A.38.4.3
CAZyme HRGMv2_3169_9 HRGMv2_3169_9_88 77306 79684 - GH13_39
CAZyme HRGMv2_3169_9 HRGMv2_3169_9_89 79672 81150 - GT5
CAZyme HRGMv2_3169_9 HRGMv2_3169_9_90 81195 83165 - GH13_9
Gene ID: HRGMv2_3169_9_83
Type: TC
Location: 71805 - 72545 (-)
Gene ID: HRGMv2_3169_9_84
Type: TC
Location: 72556 - 73686 (-)
Gene ID: HRGMv2_3169_9_85
Type: TC
Location: 73743 - 74630 (-)
Gene ID: HRGMv2_3169_9_86
Type: TC
Location: 75166 - 76494 (+)
Gene ID: HRGMv2_3169_9_87
Type: TC
Location: 76539 - 77186 (+)
Gene ID: HRGMv2_3169_9_88
Type: CAZyme
Location: 77306 - 79684 (-)
Gene ID: HRGMv2_3169_9_89
Type: CAZyme
Location: 79672 - 81150 (-)
Gene ID: HRGMv2_3169_9_90
Type: CAZyme
Location: 81195 - 83165 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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