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Cluster: HRGMv2_3169_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3169_1 HRGMv2_3169_1_131 131476 132090 + 9.B.18.1.1
pfam HRGMv2_3169_1 HRGMv2_3169_1_132 132087 132980 + NmrA | NAD_binding_10
CAZyme HRGMv2_3169_1 HRGMv2_3169_1_133 132982 134073 + GT4
CAZyme HRGMv2_3169_1 HRGMv2_3169_1_134 134070 135170 + GT4
pfam HRGMv2_3169_1 HRGMv2_3169_1_135 135167 135901 + DUF2334
CAZyme HRGMv2_3169_1 HRGMv2_3169_1_136 135908 136993 + GT4
pfam HRGMv2_3169_1 HRGMv2_3169_1_137 136995 137930 + ATPgrasp_TupA
CAZyme HRGMv2_3169_1 HRGMv2_3169_1_138 137935 139041 + GT4
TC HRGMv2_3169_1 HRGMv2_3169_1_139 139046 140497 + 2.A.66.2.2
Gene ID: HRGMv2_3169_1_131
Type: TC
Location: 131476 - 132090 (+)
Gene ID: HRGMv2_3169_1_132
Type: pfam
Location: 132087 - 132980 (+)
Gene ID: HRGMv2_3169_1_133
Type: CAZyme
Location: 132982 - 134073 (+)
Gene ID: HRGMv2_3169_1_134
Type: CAZyme
Location: 134070 - 135170 (+)
Gene ID: HRGMv2_3169_1_135
Type: pfam
Location: 135167 - 135901 (+)
Gene ID: HRGMv2_3169_1_136
Type: CAZyme
Location: 135908 - 136993 (+)
Gene ID: HRGMv2_3169_1_137
Type: pfam
Location: 136995 - 137930 (+)
Gene ID: HRGMv2_3169_1_138
Type: CAZyme
Location: 137935 - 139041 (+)
Gene ID: HRGMv2_3169_1_139
Type: TC
Location: 139046 - 140497 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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