Genome Details
Selected Rep_genome_ID: HRGMv2_3132
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium sp018380115
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3132 | 2,596,729 | 97.27% | 1.422% | Italy | Europe | HRGM |
| MGYG000004143 | 2,687,276 | 96.6% | 1.36% | United Kingdom | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3132_CGC14 | CGCFAM_00004 | Yes | 7 | 2 | alpha-glucan |
| HRGMv2_3132_CGC2 | CGCFAM_00107 | Yes | 8 | 2 | beta-glucan |
| HRGMv2_3132_CGC25 | CGCFAM_00989 | Yes | 7 | 2 | |
| HRGMv2_3132_CGC19 | CGCFAM_03590 | Yes | 5 | 1 | |
| HRGMv2_3132_CGC22 | CGCFAM_05834 | Yes | 4 | 1 | |
| HRGMv2_3132_CGC8 | CGCFAM_07005 | Yes | 7 | 2 | |
| HRGMv2_3132_CGC11 | CGCFAM_08184 | Yes | 9 | 1 | |
| HRGMv2_3132_CGC16 | CGCFAM_10187 | Yes | 7 | 1 | |
| HRGMv2_3132_CGC5 | CGCFAM_10188 | Yes | 14 | 1 | |
| HRGMv2_3132_CGC1 | CGCFAM_10189 | Yes | 11 | 1 |
Top CAZyme Families