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Cluster: HRGMv2_3132_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3132_13 HRGMv2_3132_13_18 21504 22226 - GT51
pfam HRGMv2_3132_13 HRGMv2_3132_13_19 22465 22578 - RUBY_RBDX
pfam HRGMv2_3132_13 HRGMv2_3132_13_20 22675 23871 - Flavodoxin_1 | Lactamase_B | ODP
TC HRGMv2_3132_13 HRGMv2_3132_13_21 23988 25565 - 1.I.1.1.3
TC HRGMv2_3132_13 HRGMv2_3132_13_22 25698 26567 + 2.A.115.1.2
TC HRGMv2_3132_13 HRGMv2_3132_13_23 26808 27392 + 2.A.107.1.1
TC HRGMv2_3132_13 HRGMv2_3132_13_24 27538 28947 + 2.A.22.5.3
Gene ID: HRGMv2_3132_13_18
Type: CAZyme
Location: 21504 - 22226 (-)
Gene ID: HRGMv2_3132_13_19
Type: pfam
Location: 22465 - 22578 (-)
Gene ID: HRGMv2_3132_13_20
Type: pfam
Location: 22675 - 23871 (-)
Gene ID: HRGMv2_3132_13_21
Type: TC
Location: 23988 - 25565 (-)
Gene ID: HRGMv2_3132_13_22
Type: TC
Location: 25698 - 26567 (+)
Gene ID: HRGMv2_3132_13_23
Type: TC
Location: 26808 - 27392 (+)
Gene ID: HRGMv2_3132_13_24
Type: TC
Location: 27538 - 28947 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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