Cluster: HRGMv2_3132_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_3132
- CGC Family ID: CGCFAM_00004
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3132_10 | HRGMv2_3132_10_48 | 56408 | 57823 | + | 3.A.1.19.5 |
| NULL(UNKNOWN) | HRGMv2_3132_10 | HRGMv2_3132_10_49 | 57972 | 59918 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3132_10 | HRGMv2_3132_10_50 | 60258 | 61193 | + | CorA |
| CAZyme | HRGMv2_3132_10 | HRGMv2_3132_10_51 | 61616 | 63622 | + | CBM48 | GH13_9 |
| pfam | HRGMv2_3132_10 | HRGMv2_3132_10_52 | 63686 | 64900 | + | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_3132_10 | HRGMv2_3132_10_53 | 64894 | 66015 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_3132_10 | HRGMv2_3132_10_54 | 66074 | 67498 | + | GT5 |
Gene ID: HRGMv2_3132_10_48
Type: TC
Location: 56408 - 57823 (+)
Type: TC
Location: 56408 - 57823 (+)
Gene ID: HRGMv2_3132_10_49
Type:
Location: 57972 - 59918 (+)
Type:
Location: 57972 - 59918 (+)
Gene ID: HRGMv2_3132_10_50
Type: pfam
Location: 60258 - 61193 (+)
Type: pfam
Location: 60258 - 61193 (+)
Gene ID: HRGMv2_3132_10_51
Type: CAZyme
Location: 61616 - 63622 (+)
Type: CAZyme
Location: 61616 - 63622 (+)
Gene ID: HRGMv2_3132_10_52
Type: pfam
Location: 63686 - 64900 (+)
Type: pfam
Location: 63686 - 64900 (+)
Gene ID: HRGMv2_3132_10_53
Type: pfam
Location: 64894 - 66015 (+)
Type: pfam
Location: 64894 - 66015 (+)
Gene ID: HRGMv2_3132_10_54
Type: CAZyme
Location: 66074 - 67498 (+)
Type: CAZyme
Location: 66074 - 67498 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium sp018380115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.