Cluster: HRGMv2_3132_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3132
- CGC Family ID: CGCFAM_03590
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3132_24 | HRGMv2_3132_24_27 | 28408 | 29343 | - | 3.A.1.2.4 |
| TC | HRGMv2_3132_24 | HRGMv2_3132_24_28 | 29363 | 30856 | - | 3.A.1.2.20 |
| pfam | HRGMv2_3132_24 | HRGMv2_3132_24_29 | 30917 | 31579 | - | Glyoxalase |
| pfam | HRGMv2_3132_24 | HRGMv2_3132_24_30 | 31599 | 32117 | - | Glyoxalase |
| CAZyme | HRGMv2_3132_24 | HRGMv2_3132_24_31 | 32145 | 32810 | - | GH1 |
Gene ID: HRGMv2_3132_24_27
Type: TC
Location: 28408 - 29343 (-)
Type: TC
Location: 28408 - 29343 (-)
Gene ID: HRGMv2_3132_24_28
Type: TC
Location: 29363 - 30856 (-)
Type: TC
Location: 29363 - 30856 (-)
Gene ID: HRGMv2_3132_24_29
Type: pfam
Location: 30917 - 31579 (-)
Type: pfam
Location: 30917 - 31579 (-)
Gene ID: HRGMv2_3132_24_30
Type: pfam
Location: 31599 - 32117 (-)
Type: pfam
Location: 31599 - 32117 (-)
Gene ID: HRGMv2_3132_24_31
Type: CAZyme
Location: 32145 - 32810 (-)
Type: CAZyme
Location: 32145 - 32810 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium sp018380115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.