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Cluster: HRGMv2_3132_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3132_8 HRGMv2_3132_8_2 1332 5909 + GH25
NULL(UNKNOWN) HRGMv2_3132_8 HRGMv2_3132_8_3 6650 6877 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3132_8 HRGMv2_3132_8_4 6932 7549 + Ham1p_like
TC HRGMv2_3132_8 HRGMv2_3132_8_5 8589 10148 + 2.A.35.2.1
TC HRGMv2_3132_8 HRGMv2_3132_8_6 10614 12305 + 3.A.1.5.2
TC HRGMv2_3132_8 HRGMv2_3132_8_7 12569 13513 + 3.A.1.5.2
TC HRGMv2_3132_8 HRGMv2_3132_8_8 13518 14534 + 3.A.1.5.2
TC HRGMv2_3132_8 HRGMv2_3132_8_9 14540 15541 + 3.A.1.5.2
TC HRGMv2_3132_8 HRGMv2_3132_8_10 15544 16518 + 3.A.1.5.20
Gene ID: HRGMv2_3132_8_2
Type: CAZyme
Location: 1332 - 5909 (+)
Gene ID: HRGMv2_3132_8_3
Type:
Location: 6650 - 6877 (-)
Gene ID: HRGMv2_3132_8_4
Type: pfam
Location: 6932 - 7549 (+)
Gene ID: HRGMv2_3132_8_5
Type: TC
Location: 8589 - 10148 (+)
Gene ID: HRGMv2_3132_8_6
Type: TC
Location: 10614 - 12305 (+)
Gene ID: HRGMv2_3132_8_7
Type: TC
Location: 12569 - 13513 (+)
Gene ID: HRGMv2_3132_8_8
Type: TC
Location: 13518 - 14534 (+)
Gene ID: HRGMv2_3132_8_9
Type: TC
Location: 14540 - 15541 (+)
Gene ID: HRGMv2_3132_8_10
Type: TC
Location: 15544 - 16518 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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