Cluster: HRGMv2_3132_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3132
- CGC Family ID: CGCFAM_07005
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3132_4 | HRGMv2_3132_4_113 | 104197 | 105150 | + | 3.A.1.34.1 |
| TC | HRGMv2_3132_4 | HRGMv2_3132_4_114 | 105143 | 105937 | + | 3.A.1.34.1 |
| NULL(UNKNOWN) | HRGMv2_3132_4 | HRGMv2_3132_4_115 | 106125 | 107564 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3132_4 | HRGMv2_3132_4_116 | 107979 | 108785 | - | CE4 |
| pfam | HRGMv2_3132_4 | HRGMv2_3132_4_117 | 108887 | 110194 | + | RmuC |
| STP | HRGMv2_3132_4 | HRGMv2_3132_4_118 | 110989 | 111627 | + | TetR_N |
| CAZyme | HRGMv2_3132_4 | HRGMv2_3132_4_119 | 111617 | 112801 | + | GH3 |
Gene ID: HRGMv2_3132_4_113
Type: TC
Location: 104197 - 105150 (+)
Type: TC
Location: 104197 - 105150 (+)
Gene ID: HRGMv2_3132_4_114
Type: TC
Location: 105143 - 105937 (+)
Type: TC
Location: 105143 - 105937 (+)
Gene ID: HRGMv2_3132_4_115
Type:
Location: 106125 - 107564 (+)
Type:
Location: 106125 - 107564 (+)
Gene ID: HRGMv2_3132_4_116
Type: CAZyme
Location: 107979 - 108785 (-)
Type: CAZyme
Location: 107979 - 108785 (-)
Gene ID: HRGMv2_3132_4_117
Type: pfam
Location: 108887 - 110194 (+)
Type: pfam
Location: 108887 - 110194 (+)
Gene ID: HRGMv2_3132_4_118
Type: STP
Location: 110989 - 111627 (+)
Type: STP
Location: 110989 - 111627 (+)
Gene ID: HRGMv2_3132_4_119
Type: CAZyme
Location: 111617 - 112801 (+)
Type: CAZyme
Location: 111617 - 112801 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruthenibacterium
Species
Ruthenibacterium sp018380115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.