Genome Details
Selected Rep_genome_ID: HRGMv2_2845
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha merdavium
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR027220 | 2,417,430 | 93.18% | 0.67% | China | Asia | CGMR |
| HRGMv2_2845 | 2,855,361 | 95.63% | 0.335% | UK | Europe | HRGM |
| MGYG000001723 | 2,328,137 | 93.4% | 0.67% | Sweden | Europe | UHGG |
| SW098_bin.76 | 2,513,908 | 94.3% | 0.67% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2845_CGC12 | CGCFAM_00010 | Yes | 8 | 1 | alpha-glucan |
| HRGMv2_2845_CGC10 | CGCFAM_00037 | Yes | 5 | 2 | alpha-glucan |
| HRGMv2_2845_CGC23 | CGCFAM_00045 | Yes | 8 | 3 | alpha-glucan |
| HRGMv2_2845_CGC9 | CGCFAM_00173 | Yes | 12 | 2 | |
| HRGMv2_2845_CGC2 | CGCFAM_00455 | Yes | 3 | 1 | |
| HRGMv2_2845_CGC14 | CGCFAM_01602 | Yes | 13 | 4 | |
| HRGMv2_2845_CGC3 | CGCFAM_01648 | Yes | 16 | 4 | |
| HRGMv2_2845_CGC11 | CGCFAM_02579 | Yes | 7 | 3 | |
| HRGMv2_2845_CGC20 | CGCFAM_04702 | Yes | 5 | 1 | |
| HRGMv2_2845_CGC16 | CGCFAM_07180 | Yes | 6 | 1 |
Top CAZyme Families