Cluster: HRGMv2_2845_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2845
- CGC Family ID: CGCFAM_02579
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2845_7 | HRGMv2_2845_7_85 | 95861 | 96775 | + | 3.A.1.1.23 |
| TC | HRGMv2_2845_7 | HRGMv2_2845_7_86 | 96768 | 97595 | + | 3.A.1.1.34 |
| CAZyme | HRGMv2_2845_7 | HRGMv2_2845_7_87 | 97607 | 98962 | + | GH30_2 |
| CAZyme | HRGMv2_2845_7 | HRGMv2_2845_7_88 | 98965 | 100311 | + | GH30_1 |
| peptidase | HRGMv2_2845_7 | HRGMv2_2845_7_89 | 100391 | 101263 | - | C40.UPW |
| NULL(UNKNOWN) | HRGMv2_2845_7 | HRGMv2_2845_7_90 | 101285 | 101572 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2845_7 | HRGMv2_2845_7_91 | 101740 | 103947 | - | GT51 |
Gene ID: HRGMv2_2845_7_85
Type: TC
Location: 95861 - 96775 (+)
Type: TC
Location: 95861 - 96775 (+)
Gene ID: HRGMv2_2845_7_86
Type: TC
Location: 96768 - 97595 (+)
Type: TC
Location: 96768 - 97595 (+)
Gene ID: HRGMv2_2845_7_87
Type: CAZyme
Location: 97607 - 98962 (+)
Type: CAZyme
Location: 97607 - 98962 (+)
Gene ID: HRGMv2_2845_7_88
Type: CAZyme
Location: 98965 - 100311 (+)
Type: CAZyme
Location: 98965 - 100311 (+)
Gene ID: HRGMv2_2845_7_89
Type: peptidase
Location: 100391 - 101263 (-)
Type: peptidase
Location: 100391 - 101263 (-)
Gene ID: HRGMv2_2845_7_90
Type:
Location: 101285 - 101572 (-)
Type:
Location: 101285 - 101572 (-)
Gene ID: HRGMv2_2845_7_91
Type: CAZyme
Location: 101740 - 103947 (-)
Type: CAZyme
Location: 101740 - 103947 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.