Cluster: HRGMv2_2845_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2845
- CGC Family ID: CGCFAM_07180
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2845_18 | HRGMv2_2845_18_52 | 43153 | 44358 | - | GH3 |
| TC | HRGMv2_2845_18 | HRGMv2_2845_18_53 | 44456 | 45529 | + | 9.B.10.1.1 |
| pfam | HRGMv2_2845_18 | HRGMv2_2845_18_54 | 45522 | 46475 | + | DUF1980_C |
| STP | HRGMv2_2845_18 | HRGMv2_2845_18_55 | 46563 | 47501 | + | Peripla_BP_2 |
| TC | HRGMv2_2845_18 | HRGMv2_2845_18_56 | 47467 | 48492 | + | 3.A.1.14.16 |
| TC | HRGMv2_2845_18 | HRGMv2_2845_18_57 | 48485 | 49240 | + | 3.A.1.14.8 |
Gene ID: HRGMv2_2845_18_52
Type: CAZyme
Location: 43153 - 44358 (-)
Type: CAZyme
Location: 43153 - 44358 (-)
Gene ID: HRGMv2_2845_18_53
Type: TC
Location: 44456 - 45529 (+)
Type: TC
Location: 44456 - 45529 (+)
Gene ID: HRGMv2_2845_18_54
Type: pfam
Location: 45522 - 46475 (+)
Type: pfam
Location: 45522 - 46475 (+)
Gene ID: HRGMv2_2845_18_55
Type: STP
Location: 46563 - 47501 (+)
Type: STP
Location: 46563 - 47501 (+)
Gene ID: HRGMv2_2845_18_56
Type: TC
Location: 47467 - 48492 (+)
Type: TC
Location: 47467 - 48492 (+)
Gene ID: HRGMv2_2845_18_57
Type: TC
Location: 48485 - 49240 (+)
Type: TC
Location: 48485 - 49240 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.