Cluster: HRGMv2_2845_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2845
- CGC Family ID: CGCFAM_00037
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2845_7 | HRGMv2_2845_7_76 | 83823 | 85343 | - | GH13_36 |
| TC | HRGMv2_2845_7 | HRGMv2_2845_7_77 | 85345 | 86196 | - | 3.A.1.1.27 |
| TC | HRGMv2_2845_7 | HRGMv2_2845_7_78 | 86193 | 87506 | - | 3.A.1.1.27 |
| pfam | HRGMv2_2845_7 | HRGMv2_2845_7_79 | 87540 | 89027 | - | SBP_bac_1 | SBP_bac_8 |
| CAZyme | HRGMv2_2845_7 | HRGMv2_2845_7_80 | 89031 | 90704 | - | CBM34 | GH13_20 |
Gene ID: HRGMv2_2845_7_76
Type: CAZyme
Location: 83823 - 85343 (-)
Type: CAZyme
Location: 83823 - 85343 (-)
Gene ID: HRGMv2_2845_7_77
Type: TC
Location: 85345 - 86196 (-)
Type: TC
Location: 85345 - 86196 (-)
Gene ID: HRGMv2_2845_7_78
Type: TC
Location: 86193 - 87506 (-)
Type: TC
Location: 86193 - 87506 (-)
Gene ID: HRGMv2_2845_7_79
Type: pfam
Location: 87540 - 89027 (-)
Type: pfam
Location: 87540 - 89027 (-)
Gene ID: HRGMv2_2845_7_80
Type: CAZyme
Location: 89031 - 90704 (-)
Type: CAZyme
Location: 89031 - 90704 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2845_7_77 | vegetarian > vegan | 1.65115 | 0.00701 |