Genome Details
Selected Rep_genome_ID: HRGMv2_2788
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_I
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| B6.bin_26 | 2,263,866 | 91.84% | 2.04% | China(Inner Mongolia) | Asia | IMGG |
| CGMR072209 | 2,071,710 | 97.77% | 1.02% | China | Asia | CGMR |
| HRGMv2_2788 | 3,000,582 | 100% | 0% | NA | NA | HRGM |
| SPMP66_bin.42 | 2,091,152 | 92.21% | 0.68% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2788_CGC2 | CGCFAM_00075 | Yes | 3 | 1 | |
| HRGMv2_2788_CGC3 | CGCFAM_00252 | Yes | 5 | 1 | |
| HRGMv2_2788_CGC30 | CGCFAM_00507 | Yes | 5 | 2 | |
| HRGMv2_2788_CGC7 | CGCFAM_00605 | Yes | 9 | 2 | |
| HRGMv2_2788_CGC21 | CGCFAM_01236 | Yes | 12 | 2 | |
| HRGMv2_2788_CGC9 | CGCFAM_01321 | Yes | 8 | 1 | |
| HRGMv2_2788_CGC27 | CGCFAM_01424 | Yes | 9 | 2 | |
| HRGMv2_2788_CGC10 | CGCFAM_02275 | Yes | 3 | 1 | |
| HRGMv2_2788_CGC18 | CGCFAM_02322 | Yes | 7 | 3 | |
| HRGMv2_2788_CGC13 | CGCFAM_03687 | Yes | 7 | 1 | |
| HRGMv2_2788_CGC11 | CGCFAM_05126 | Yes | 8 | 2 |
Top CAZyme Families