Cluster: HRGMv2_2788_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2788
- CGC Family ID: CGCFAM_00507
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2788_2 | HRGMv2_2788_2_103 | 111634 | 113259 | + | 3.A.1.111.4 |
| TC | HRGMv2_2788_2 | HRGMv2_2788_2_104 | 113317 | 114834 | - | 2.A.21.2.5 |
| pfam | HRGMv2_2788_2 | HRGMv2_2788_2_105 | 115090 | 115644 | - | GtrA_DPMS_TM |
| CAZyme | HRGMv2_2788_2 | HRGMv2_2788_2_106 | 115666 | 118083 | - | GH3 |
| CAZyme | HRGMv2_2788_2 | HRGMv2_2788_2_107 | 118203 | 121079 | - | GH3 |
Gene ID: HRGMv2_2788_2_103
Type: TC
Location: 111634 - 113259 (+)
Type: TC
Location: 111634 - 113259 (+)
Gene ID: HRGMv2_2788_2_104
Type: TC
Location: 113317 - 114834 (-)
Type: TC
Location: 113317 - 114834 (-)
Gene ID: HRGMv2_2788_2_105
Type: pfam
Location: 115090 - 115644 (-)
Type: pfam
Location: 115090 - 115644 (-)
Gene ID: HRGMv2_2788_2_106
Type: CAZyme
Location: 115666 - 118083 (-)
Type: CAZyme
Location: 115666 - 118083 (-)
Gene ID: HRGMv2_2788_2_107
Type: CAZyme
Location: 118203 - 121079 (-)
Type: CAZyme
Location: 118203 - 121079 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_I
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.