dbCAN HGM

Cluster: HRGMv2_2788_CGC18

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_2788_1	HRGMv2_2788_1_1549	1684455	1685231	-	GT32
TC	HRGMv2_2788_1	HRGMv2_2788_1_1550	1685251	1686324	-	9.B.183.1.9
CAZyme	HRGMv2_2788_1	HRGMv2_2788_1_1551	1686343	1687332	-	GT2
pfam	HRGMv2_2788_1	HRGMv2_2788_1_1552	1687322	1688146	-	Glycos_transf_2
CAZyme	HRGMv2_2788_1	HRGMv2_2788_1_1553	1688143	1689270	-	GT4
NULL(UNKNOWN)	HRGMv2_2788_1	HRGMv2_2788_1_1554	1689484	1689696	-	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_2788_1	HRGMv2_2788_1_1555	1690200	1691591	-	2.A.25.1.5

Gene ID: HRGMv2_2788_1_1549
Type: CAZyme
Location: 1684455 - 1685231 (-)

Gene ID: HRGMv2_2788_1_1550
Type: TC
Location: 1685251 - 1686324 (-)

Gene ID: HRGMv2_2788_1_1551
Type: CAZyme
Location: 1686343 - 1687332 (-)

Gene ID: HRGMv2_2788_1_1552
Type: pfam
Location: 1687322 - 1688146 (-)

Gene ID: HRGMv2_2788_1_1553
Type: CAZyme
Location: 1688143 - 1689270 (-)

Gene ID: HRGMv2_2788_1_1554
Type:
Location: 1689484 - 1689696 (-)

Gene ID: HRGMv2_2788_1_1555
Type: TC
Location: 1690200 - 1691591 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.