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Cluster: HRGMv2_2788_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2788_1 HRGMv2_2788_1_837 922113 924035 + GH2
CAZyme HRGMv2_2788_1 HRGMv2_2788_1_838 924114 927119 + GH3
TC HRGMv2_2788_1 HRGMv2_2788_1_839 927249 928814 + 2.A.2.3.6
TC HRGMv2_2788_1 HRGMv2_2788_1_840 928974 930443 + 8.A.59.2.1
TF HRGMv2_2788_1 HRGMv2_2788_1_841 930440 931228 + HTH_AraC
TC HRGMv2_2788_1 HRGMv2_2788_1_842 931441 932472 + 2.A.56.1.5
TC HRGMv2_2788_1 HRGMv2_2788_1_843 932485 933039 + 2.A.56.1.5
TC HRGMv2_2788_1 HRGMv2_2788_1_844 933043 934344 + 2.A.56.1.5
Gene ID: HRGMv2_2788_1_837
Type: CAZyme
Location: 922113 - 924035 (+)
Gene ID: HRGMv2_2788_1_838
Type: CAZyme
Location: 924114 - 927119 (+)
Gene ID: HRGMv2_2788_1_839
Type: TC
Location: 927249 - 928814 (+)
Gene ID: HRGMv2_2788_1_840
Type: TC
Location: 928974 - 930443 (+)
Gene ID: HRGMv2_2788_1_841
Type: TF
Location: 930440 - 931228 (+)
Gene ID: HRGMv2_2788_1_842
Type: TC
Location: 931441 - 932472 (+)
Gene ID: HRGMv2_2788_1_843
Type: TC
Location: 932485 - 933039 (+)
Gene ID: HRGMv2_2788_1_844
Type: TC
Location: 933043 - 934344 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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