dbCAN HGM

Cluster: HRGMv2_2788_CGC27

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_2788_1	HRGMv2_2788_1_2372	2557580	2558707	-	CE9
sulfatase	HRGMv2_2788_1	HRGMv2_2788_1_2373	2558704	2559432	-	S1_9
TC	HRGMv2_2788_1	HRGMv2_2788_1_2374	2559658	2561130	-	4.A.1.1.7
pfam	HRGMv2_2788_1	HRGMv2_2788_1_2375	2561462	2562373	+	TRM5-TYW2_MTfase \| MTS \| PrmA \| Methyltransf_11 \| Methyltransf_12 \| Methyltransf_23 \| Methyltransf_25 \| Methyltransf_31
pfam	HRGMv2_2788_1	HRGMv2_2788_1_2376	2562532	2563275	+	Methyltrans_RNA \| PUA_4
TC	HRGMv2_2788_1	HRGMv2_2788_1_2377	2563336	2564967	-	8.A.7.1.5
pfam	HRGMv2_2788_1	HRGMv2_2788_1_2378	2564964	2566157	-	Patatin
TF	HRGMv2_2788_1	HRGMv2_2788_1_2379	2566287	2567015	-	LytTR
CAZyme	HRGMv2_2788_1	HRGMv2_2788_1_2380	2567127	2568068	+	GT2

Gene ID: HRGMv2_2788_1_2372
Type: CAZyme
Location: 2557580 - 2558707 (-)

Gene ID: HRGMv2_2788_1_2373
Type: sulfatase
Location: 2558704 - 2559432 (-)

Gene ID: HRGMv2_2788_1_2374
Type: TC
Location: 2559658 - 2561130 (-)

Gene ID: HRGMv2_2788_1_2375
Type: pfam
Location: 2561462 - 2562373 (+)

Gene ID: HRGMv2_2788_1_2376
Type: pfam
Location: 2562532 - 2563275 (+)

Gene ID: HRGMv2_2788_1_2377
Type: TC
Location: 2563336 - 2564967 (-)

Gene ID: HRGMv2_2788_1_2378
Type: pfam
Location: 2564964 - 2566157 (-)

Gene ID: HRGMv2_2788_1_2379
Type: TF
Location: 2566287 - 2567015 (-)

Gene ID: HRGMv2_2788_1_2380
Type: CAZyme
Location: 2567127 - 2568068 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.