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Cluster: HRGMv2_2788_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2788_1 HRGMv2_2788_1_352 375877 377349 + CE1
TC HRGMv2_2788_1 HRGMv2_2788_1_353 377426 379354 - 3.A.1.135.5
TC HRGMv2_2788_1 HRGMv2_2788_1_354 379354 381105 - 3.A.1.135.5
TF HRGMv2_2788_1 HRGMv2_2788_1_355 381204 381710 - MarR
sulfatase HRGMv2_2788_1 HRGMv2_2788_1_356 382077 383072 - S1_15
CAZyme HRGMv2_2788_1 HRGMv2_2788_1_357 383273 384706 - GH1
pfam HRGMv2_2788_1 HRGMv2_2788_1_358 385140 386009 + SAICAR_synt
TC HRGMv2_2788_1 HRGMv2_2788_1_359 386246 387115 + 2.A.115.1.1
TC HRGMv2_2788_1 HRGMv2_2788_1_360 387493 388794 + 2.A.11.1.2
Gene ID: HRGMv2_2788_1_352
Type: CAZyme
Location: 375877 - 377349 (+)
Gene ID: HRGMv2_2788_1_353
Type: TC
Location: 377426 - 379354 (-)
Gene ID: HRGMv2_2788_1_354
Type: TC
Location: 379354 - 381105 (-)
Gene ID: HRGMv2_2788_1_355
Type: TF
Location: 381204 - 381710 (-)
Gene ID: HRGMv2_2788_1_356
Type: sulfatase
Location: 382077 - 383072 (-)
Gene ID: HRGMv2_2788_1_357
Type: CAZyme
Location: 383273 - 384706 (-)
Gene ID: HRGMv2_2788_1_358
Type: pfam
Location: 385140 - 386009 (+)
Gene ID: HRGMv2_2788_1_359
Type: TC
Location: 386246 - 387115 (+)
Gene ID: HRGMv2_2788_1_360
Type: TC
Location: 387493 - 388794 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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