Cluster: HRGMv2_2788_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2788
- CGC Family ID: CGCFAM_00252
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2788_1 | HRGMv2_2788_1_284 | 296796 | 298415 | - | GT4 |
| NULL(UNKNOWN) | HRGMv2_2788_1 | HRGMv2_2788_1_285 | 298451 | 299272 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2788_1 | HRGMv2_2788_1_286 | 299322 | 300446 | - | Acyl_transf_3 |
| TC | HRGMv2_2788_1 | HRGMv2_2788_1_287 | 300823 | 302304 | + | 4.C.1.1.6 |
| TC | HRGMv2_2788_1 | HRGMv2_2788_1_288 | 302460 | 303935 | + | 4.C.1.1.7 |
Gene ID: HRGMv2_2788_1_284
Type: CAZyme
Location: 296796 - 298415 (-)
Type: CAZyme
Location: 296796 - 298415 (-)
Gene ID: HRGMv2_2788_1_285
Type:
Location: 298451 - 299272 (-)
Type:
Location: 298451 - 299272 (-)
Gene ID: HRGMv2_2788_1_286
Type: pfam
Location: 299322 - 300446 (-)
Type: pfam
Location: 299322 - 300446 (-)
Gene ID: HRGMv2_2788_1_287
Type: TC
Location: 300823 - 302304 (+)
Type: TC
Location: 300823 - 302304 (+)
Gene ID: HRGMv2_2788_1_288
Type: TC
Location: 302460 - 303935 (+)
Type: TC
Location: 302460 - 303935 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_I
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.