Genome Details
Selected Rep_genome_ID: HRGMv2_2772
Total Genomes Found: 25
Total Genomes Found: 25
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_D
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A1.bin_1 | 2,881,035 | 100% | 0% | China(Inner Mongolia) | Asia | IMGG |
| AG402_maxbin.011 | 2,423,176 | 96.98% | 1.37% | NA | Africa | H3AfricaPhase2 |
| CGMR007911 | 2,024,117 | 96.84% | 0.85% | China | Asia | CGMR |
| CGMR034463 | 2,627,446 | 100% | 0% | China | Asia | CGMR |
| GCF_021622065.1_ASM2162206v1_genomic | 3,552,931 | 95.92% | 3.08% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_2772 | 2,733,608 | 100% | 0% | South Korea | Asia | HRGM |
| SPMP04_bin.115 | 2,176,390 | 90.59% | 1.36% | Singapore | Asia | SPMP |
| SPMP10_bin.77 | 2,371,509 | 94.9% | 0% | Singapore | Asia | SPMP |
| SPMP105_bin.26 | 2,266,375 | 96.29% | 0.68% | Singapore | Asia | SPMP |
| SPMP106_bin.116 | 2,552,343 | 99.3% | 0% | Singapore | Asia | SPMP |
| SPMP107_bin.49 | 2,290,086 | 90.19% | 2.72% | Singapore | Asia | SPMP |
| SPMP22_bin.72 | 2,320,852 | 95.9% | 0.68% | Singapore | Asia | SPMP |
| SPMP25_bin.44 | 2,438,686 | 92.95% | 4.08% | Singapore | Asia | SPMP |
| SPMP34_bin.47 | 2,542,565 | 98.3% | 0% | Singapore | Asia | SPMP |
| SPMP39_bin.5 | 2,681,334 | 99.09% | 0% | Singapore | Asia | SPMP |
| SPMP41_bin.66 | 2,439,277 | 90.99% | 4.08% | Singapore | Asia | SPMP |
| SPMP57_bin.109 | 2,283,856 | 91.86% | 0% | Singapore | Asia | SPMP |
| SPMP59_bin.41 | 2,488,694 | 91.27% | 0% | Singapore | Asia | SPMP |
| SPMP60_bin.42 | 2,363,533 | 96.35% | 0.68% | Singapore | Asia | SPMP |
| SPMP63_bin.12 | 2,611,977 | 91.16% | 4.44% | Singapore | Asia | SPMP |
| SPMP72_bin.26 | 2,317,163 | 95.73% | 0.68% | Singapore | Asia | SPMP |
| SPMP74_bin.110 | 2,210,730 | 92.4% | 3.07% | Singapore | Asia | SPMP |
| SPMP76_bin.106 | 2,503,085 | 95.81% | 1.34% | Singapore | Asia | SPMP |
| SPMP94_bin.122 | 2,495,348 | 98.98% | 0% | Singapore | Asia | SPMP |
| SPMP96_bin.19 | 2,597,534 | 96.96% | 1.36% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2772_CGC31 | CGCFAM_00027 | Yes | 3 | 1 | |
| HRGMv2_2772_CGC4 | CGCFAM_00673 | Yes | 4 | 3 | |
| HRGMv2_2772_CGC16 | CGCFAM_00679 | Yes | 9 | 1 | |
| HRGMv2_2772_CGC7 | CGCFAM_00688 | Yes | 9 | 3 | |
| HRGMv2_2772_CGC2 | CGCFAM_00783 | Yes | 6 | 1 | |
| HRGMv2_2772_CGC13 | CGCFAM_01090 | Yes | 5 | 1 | |
| HRGMv2_2772_CGC27 | CGCFAM_01175 | Yes | 4 | 2 | |
| HRGMv2_2772_CGC28 | CGCFAM_01236 | Yes | 11 | 2 | |
| HRGMv2_2772_CGC14 | CGCFAM_01786 | Yes | 5 | 1 | |
| HRGMv2_2772_CGC20 | CGCFAM_05221 | Yes | 5 | 1 |
Top CAZyme Families