Cluster: HRGMv2_2772_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2772
- CGC Family ID: CGCFAM_00783
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_24 | 27109 | 28083 | + | GT2 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_25 | 28172 | 29104 | - | 3.A.1.5.19 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_26 | 29105 | 30202 | - | 3.A.1.5.25 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_27 | 30216 | 31319 | - | 3.A.1.5.19 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_28 | 31321 | 32256 | - | 3.A.1.5.19 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_29 | 32419 | 34116 | - | 3.A.1.5.19 |
Gene ID: HRGMv2_2772_1_24
Type: CAZyme
Location: 27109 - 28083 (+)
Type: CAZyme
Location: 27109 - 28083 (+)
Gene ID: HRGMv2_2772_1_25
Type: TC
Location: 28172 - 29104 (-)
Type: TC
Location: 28172 - 29104 (-)
Gene ID: HRGMv2_2772_1_26
Type: TC
Location: 29105 - 30202 (-)
Type: TC
Location: 29105 - 30202 (-)
Gene ID: HRGMv2_2772_1_27
Type: TC
Location: 30216 - 31319 (-)
Type: TC
Location: 30216 - 31319 (-)
Gene ID: HRGMv2_2772_1_28
Type: TC
Location: 31321 - 32256 (-)
Type: TC
Location: 31321 - 32256 (-)
Gene ID: HRGMv2_2772_1_29
Type: TC
Location: 32419 - 34116 (-)
Type: TC
Location: 32419 - 34116 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.