Cluster: HRGMv2_2772_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2772
- CGC Family ID: CGCFAM_01175
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_1992 | 2199983 | 2200774 | - | GT2 |
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_1993 | 2200780 | 2203203 | - | GT2 | GT2 |
| pfam | HRGMv2_2772_1 | HRGMv2_2772_1_1994 | 2203334 | 2204383 | - | SpoIID |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_1995 | 2204540 | 2206462 | - | 8.A.59.4.1 |
Gene ID: HRGMv2_2772_1_1992
Type: CAZyme
Location: 2199983 - 2200774 (-)
Type: CAZyme
Location: 2199983 - 2200774 (-)
Gene ID: HRGMv2_2772_1_1993
Type: CAZyme
Location: 2200780 - 2203203 (-)
Type: CAZyme
Location: 2200780 - 2203203 (-)
Gene ID: HRGMv2_2772_1_1994
Type: pfam
Location: 2203334 - 2204383 (-)
Type: pfam
Location: 2203334 - 2204383 (-)
Gene ID: HRGMv2_2772_1_1995
Type: TC
Location: 2204540 - 2206462 (-)
Type: TC
Location: 2204540 - 2206462 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.