Cluster: HRGMv2_2772_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2772
- CGC Family ID: CGCFAM_00673
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_165 | 197969 | 198943 | + | GT2 |
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_166 | 198965 | 199963 | + | GT2 |
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_167 | 199982 | 200959 | + | GT2 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_168 | 201256 | 201837 | + | 2.A.107.1.2 |
Gene ID: HRGMv2_2772_1_165
Type: CAZyme
Location: 197969 - 198943 (+)
Type: CAZyme
Location: 197969 - 198943 (+)
Gene ID: HRGMv2_2772_1_166
Type: CAZyme
Location: 198965 - 199963 (+)
Type: CAZyme
Location: 198965 - 199963 (+)
Gene ID: HRGMv2_2772_1_167
Type: CAZyme
Location: 199982 - 200959 (+)
Type: CAZyme
Location: 199982 - 200959 (+)
Gene ID: HRGMv2_2772_1_168
Type: TC
Location: 201256 - 201837 (+)
Type: TC
Location: 201256 - 201837 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2772_1_165 | vegan > omnivore | 1.02930 | 0.01569 |