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Cluster: HRGMv2_2772_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2772_1 HRGMv2_2772_1_646 738318 740093 - 3.A.1.135.5
TC HRGMv2_2772_1 HRGMv2_2772_1_647 740090 741829 - 3.A.1.135.5
CAZyme HRGMv2_2772_1 HRGMv2_2772_1_648 742037 742987 + GT2
pfam HRGMv2_2772_1 HRGMv2_2772_1_649 743153 744253 + SseB
TC HRGMv2_2772_1 HRGMv2_2772_1_650 744345 746162 + 1.A.33.1.4
NULL(UNKNOWN) HRGMv2_2772_1 HRGMv2_2772_1_651 746299 746436 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2772_1 HRGMv2_2772_1_652 746670 747434 - 3.A.1.3.25
TC HRGMv2_2772_1 HRGMv2_2772_1_653 747424 748188 - 3.A.1.3.20
TC HRGMv2_2772_1 HRGMv2_2772_1_654 748300 749139 - 3.A.1.3.27
Gene ID: HRGMv2_2772_1_646
Type: TC
Location: 738318 - 740093 (-)
Gene ID: HRGMv2_2772_1_647
Type: TC
Location: 740090 - 741829 (-)
Gene ID: HRGMv2_2772_1_648
Type: CAZyme
Location: 742037 - 742987 (+)
Gene ID: HRGMv2_2772_1_649
Type: pfam
Location: 743153 - 744253 (+)
Gene ID: HRGMv2_2772_1_650
Type: TC
Location: 744345 - 746162 (+)
Gene ID: HRGMv2_2772_1_651
Type:
Location: 746299 - 746436 (-)
Gene ID: HRGMv2_2772_1_652
Type: TC
Location: 746670 - 747434 (-)
Gene ID: HRGMv2_2772_1_653
Type: TC
Location: 747424 - 748188 (-)
Gene ID: HRGMv2_2772_1_654
Type: TC
Location: 748300 - 749139 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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