Cluster: HRGMv2_2772_CGC31
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2772
- CGC Family ID: CGCFAM_00027
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_2383 | 2622480 | 2623337 | - | 2.A.115.1.5 |
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_2384 | 2623330 | 2624757 | - | GH1 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_2385 | 2624814 | 2626412 | - | 4.A.1.2.11 |
Gene ID: HRGMv2_2772_1_2383
Type: TC
Location: 2622480 - 2623337 (-)
Type: TC
Location: 2622480 - 2623337 (-)
Gene ID: HRGMv2_2772_1_2384
Type: CAZyme
Location: 2623330 - 2624757 (-)
Type: CAZyme
Location: 2623330 - 2624757 (-)
Gene ID: HRGMv2_2772_1_2385
Type: TC
Location: 2624814 - 2626412 (-)
Type: TC
Location: 2624814 - 2626412 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2772_1_2383 | vegetarian > omnivore | 1.33673 | 0.02010 |
| HRGMv2_2772_1_2383 | vegetarian > vegan | 2.40329 | 0.00289 |
| HRGMv2_2772_1_2384 | vegetarian > vegan | 2.23358 | 0.00289 |
| HRGMv2_2772_1_2385 | vegetarian > vegan | 1.94356 | 0.00289 |