Cluster: HRGMv2_2772_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2772
- CGC Family ID: CGCFAM_01090
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_523 | 585200 | 586528 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_524 | 586609 | 587733 | + | GT28 |
| pfam | HRGMv2_2772_1 | HRGMv2_2772_1_525 | 587767 | 589308 | + | POTRA_1 |
| pfam | HRGMv2_2772_1 | HRGMv2_2772_1_526 | 589336 | 590814 | + | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_527 | 590872 | 592974 | - | 3.A.3.32.3 |
Gene ID: HRGMv2_2772_1_523
Type: TC
Location: 585200 - 586528 (+)
Type: TC
Location: 585200 - 586528 (+)
Gene ID: HRGMv2_2772_1_524
Type: CAZyme
Location: 586609 - 587733 (+)
Type: CAZyme
Location: 586609 - 587733 (+)
Gene ID: HRGMv2_2772_1_525
Type: pfam
Location: 587767 - 589308 (+)
Type: pfam
Location: 587767 - 589308 (+)
Gene ID: HRGMv2_2772_1_526
Type: pfam
Location: 589336 - 590814 (+)
Type: pfam
Location: 589336 - 590814 (+)
Gene ID: HRGMv2_2772_1_527
Type: TC
Location: 590872 - 592974 (-)
Type: TC
Location: 590872 - 592974 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.