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Cluster: HRGMv2_2772_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2772_1 HRGMv2_2772_1_256 297389 298630 - 9.B.10.1.1
peptidase HRGMv2_2772_1 HRGMv2_2772_1_257 299118 300917 + M24.UPB
CAZyme HRGMv2_2772_1 HRGMv2_2772_1_258 300993 301898 - GT2
CAZyme HRGMv2_2772_1 HRGMv2_2772_1_259 301913 302785 - GT2
TF HRGMv2_2772_1 HRGMv2_2772_1_260 302894 303616 + LytTR
CAZyme HRGMv2_2772_1 HRGMv2_2772_1_261 303670 304656 - GT2
pfam HRGMv2_2772_1 HRGMv2_2772_1_262 304845 305495 - Hydrolase | HAD | HAD_2
pfam HRGMv2_2772_1 HRGMv2_2772_1_263 305973 306833 + Patatin
TC HRGMv2_2772_1 HRGMv2_2772_1_264 306820 307788 + 8.A.7.1.5
Gene ID: HRGMv2_2772_1_256
Type: TC
Location: 297389 - 298630 (-)
Gene ID: HRGMv2_2772_1_257
Type: peptidase
Location: 299118 - 300917 (+)
Gene ID: HRGMv2_2772_1_258
Type: CAZyme
Location: 300993 - 301898 (-)
Gene ID: HRGMv2_2772_1_259
Type: CAZyme
Location: 301913 - 302785 (-)
Gene ID: HRGMv2_2772_1_260
Type: TF
Location: 302894 - 303616 (+)
Gene ID: HRGMv2_2772_1_261
Type: CAZyme
Location: 303670 - 304656 (-)
Gene ID: HRGMv2_2772_1_262
Type: pfam
Location: 304845 - 305495 (-)
Gene ID: HRGMv2_2772_1_263
Type: pfam
Location: 305973 - 306833 (+)
Gene ID: HRGMv2_2772_1_264
Type: TC
Location: 306820 - 307788 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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