Cluster: HRGMv2_2772_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2772
- CGC Family ID: CGCFAM_05221
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_1255 | 1375145 | 1376512 | - | 2.A.66.1.23 |
| pfam | HRGMv2_2772_1 | HRGMv2_2772_1_1256 | 1376747 | 1377088 | - | ParE_toxin |
| pfam | HRGMv2_2772_1 | HRGMv2_2772_1_1257 | 1377078 | 1377338 | - | PhdYeFM_antitox |
| CAZyme | HRGMv2_2772_1 | HRGMv2_2772_1_1258 | 1377472 | 1379484 | - | GH31_1 |
| TC | HRGMv2_2772_1 | HRGMv2_2772_1_1259 | 1379813 | 1380436 | + | 9.B.18.1.1 |
Gene ID: HRGMv2_2772_1_1255
Type: TC
Location: 1375145 - 1376512 (-)
Type: TC
Location: 1375145 - 1376512 (-)
Gene ID: HRGMv2_2772_1_1256
Type: pfam
Location: 1376747 - 1377088 (-)
Type: pfam
Location: 1376747 - 1377088 (-)
Gene ID: HRGMv2_2772_1_1257
Type: pfam
Location: 1377078 - 1377338 (-)
Type: pfam
Location: 1377078 - 1377338 (-)
Gene ID: HRGMv2_2772_1_1258
Type: CAZyme
Location: 1377472 - 1379484 (-)
Type: CAZyme
Location: 1377472 - 1379484 (-)
Gene ID: HRGMv2_2772_1_1259
Type: TC
Location: 1379813 - 1380436 (+)
Type: TC
Location: 1379813 - 1380436 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Faecalibacterium
Species
Faecalibacterium prausnitzii_D
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.