Genome Details
Selected Rep_genome_ID: HRGMv2_2653
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900545705
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR087738 | 2,420,688 | 92.57% | 0.68% | China | Asia | CGMR |
| HRGMv2_2653 | 2,592,032 | 95.27% | 0.675% | UK | Europe | HRGM |
| MGYG000000441 | 2,454,454 | 95.27% | 0.68% | Sweden | Europe | UHGG |
| Rep_42 | 2,957,527 | 93.6937% | 1.35135% | NA | NA | WIS |
| SW022_119 | 2,647,720 | 95.27% | 1.35% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2653_CGC36 | CGCFAM_03235 | Yes | 5 | 1 | |
| HRGMv2_2653_CGC16 | CGCFAM_04062 | Yes | 6 | 1 | |
| HRGMv2_2653_CGC11 | CGCFAM_04634 | Yes | 5 | 2 | |
| HRGMv2_2653_CGC24 | CGCFAM_06045 | Yes | 6 | 2 | |
| HRGMv2_2653_CGC8 | CGCFAM_06147 | Yes | 13 | 3 | |
| HRGMv2_2653_CGC23 | CGCFAM_06151 | Yes | 8 | 3 | |
| HRGMv2_2653_CGC19 | CGCFAM_07050 | Yes | 4 | 1 | |
| HRGMv2_2653_CGC12 | CGCFAM_07052 | Yes | 9 | 2 | |
| HRGMv2_2653_CGC14 | CGCFAM_07054 | Yes | 6 | 1 | |
| HRGMv2_2653_CGC26 | CGCFAM_07055 | Yes | 13 | 5 |
Top CAZyme Families