Cluster: HRGMv2_2653_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2653
- CGC Family ID: CGCFAM_06045
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2653_8 | HRGMv2_2653_8_76 | 106207 | 107619 | - | GH13 |
| TC | HRGMv2_2653_8 | HRGMv2_2653_8_77 | 107741 | 108856 | + | 3.D.2.2.1 |
| TC | HRGMv2_2653_8 | HRGMv2_2653_8_78 | 108870 | 109157 | + | 3.D.2.2.2 |
| TC | HRGMv2_2653_8 | HRGMv2_2653_8_79 | 109160 | 110569 | + | 3.D.2.2.1 |
| NULL(UNKNOWN) | HRGMv2_2653_8 | HRGMv2_2653_8_80 | 111472 | 112239 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2653_8 | HRGMv2_2653_8_81 | 112426 | 114846 | - | CBM67 | GH78 |
Gene ID: HRGMv2_2653_8_76
Type: CAZyme
Location: 106207 - 107619 (-)
Type: CAZyme
Location: 106207 - 107619 (-)
Gene ID: HRGMv2_2653_8_77
Type: TC
Location: 107741 - 108856 (+)
Type: TC
Location: 107741 - 108856 (+)
Gene ID: HRGMv2_2653_8_78
Type: TC
Location: 108870 - 109157 (+)
Type: TC
Location: 108870 - 109157 (+)
Gene ID: HRGMv2_2653_8_79
Type: TC
Location: 109160 - 110569 (+)
Type: TC
Location: 109160 - 110569 (+)
Gene ID: HRGMv2_2653_8_80
Type:
Location: 111472 - 112239 (-)
Type:
Location: 111472 - 112239 (-)
Gene ID: HRGMv2_2653_8_81
Type: CAZyme
Location: 112426 - 114846 (-)
Type: CAZyme
Location: 112426 - 114846 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900545705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.