Cluster: HRGMv2_2653_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2653
- CGC Family ID: CGCFAM_04062
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2653_4 | HRGMv2_2653_4_68 | 81629 | 82036 | - | 1.A.30.2.5 |
| pfam | HRGMv2_2653_4 | HRGMv2_2653_4_69 | 82033 | 82569 | - | MotA_ExbB |
| TC | HRGMv2_2653_4 | HRGMv2_2653_4_70 | 82570 | 83829 | - | 1.A.30.3.4 |
| NULL(UNKNOWN) | HRGMv2_2653_4 | HRGMv2_2653_4_71 | 83826 | 84413 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_2653_4 | HRGMv2_2653_4_72 | 84415 | 85827 | - | S01.UPC |
| CAZyme | HRGMv2_2653_4 | HRGMv2_2653_4_73 | 85954 | 88905 | + | GH123 |
Gene ID: HRGMv2_2653_4_68
Type: TC
Location: 81629 - 82036 (-)
Type: TC
Location: 81629 - 82036 (-)
Gene ID: HRGMv2_2653_4_69
Type: pfam
Location: 82033 - 82569 (-)
Type: pfam
Location: 82033 - 82569 (-)
Gene ID: HRGMv2_2653_4_70
Type: TC
Location: 82570 - 83829 (-)
Type: TC
Location: 82570 - 83829 (-)
Gene ID: HRGMv2_2653_4_71
Type:
Location: 83826 - 84413 (-)
Type:
Location: 83826 - 84413 (-)
Gene ID: HRGMv2_2653_4_72
Type: peptidase
Location: 84415 - 85827 (-)
Type: peptidase
Location: 84415 - 85827 (-)
Gene ID: HRGMv2_2653_4_73
Type: CAZyme
Location: 85954 - 88905 (+)
Type: CAZyme
Location: 85954 - 88905 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900545705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.