Cluster: HRGMv2_2653_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2653
- CGC Family ID: CGCFAM_07050
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2653_6 | HRGMv2_2653_6_75 | 66253 | 68238 | + | 1.B.14.17.2 |
| pfam | HRGMv2_2653_6 | HRGMv2_2653_6_76 | 68247 | 69602 | + | DUF1501 |
| NULL(UNKNOWN) | HRGMv2_2653_6 | HRGMv2_2653_6_77 | 69596 | 72136 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2653_6 | HRGMv2_2653_6_78 | 72953 | 76135 | - | GH148 | GH148 |
Gene ID: HRGMv2_2653_6_75
Type: TC
Location: 66253 - 68238 (+)
Type: TC
Location: 66253 - 68238 (+)
Gene ID: HRGMv2_2653_6_76
Type: pfam
Location: 68247 - 69602 (+)
Type: pfam
Location: 68247 - 69602 (+)
Gene ID: HRGMv2_2653_6_77
Type:
Location: 69596 - 72136 (+)
Type:
Location: 69596 - 72136 (+)
Gene ID: HRGMv2_2653_6_78
Type: CAZyme
Location: 72953 - 76135 (-)
Type: CAZyme
Location: 72953 - 76135 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900545705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.