Cluster: HRGMv2_2653_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2653
- CGC Family ID: CGCFAM_07054
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2653_3 | HRGMv2_2653_3_67 | 75262 | 76764 | - | 2.A.36.6.5 |
| CAZyme | HRGMv2_2653_3 | HRGMv2_2653_3_68 | 76845 | 77702 | + | CE1 |
| NULL(UNKNOWN) | HRGMv2_2653_3 | HRGMv2_2653_3_69 | 77823 | 78101 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2653_3 | HRGMv2_2653_3_70 | 78686 | 79633 | - | Glucokinase |
| TC | HRGMv2_2653_3 | HRGMv2_2653_3_71 | 79733 | 81196 | + | 3.D.4.3.2 |
| TC | HRGMv2_2653_3 | HRGMv2_2653_3_72 | 81205 | 82218 | + | 3.D.4.3.2 |
Gene ID: HRGMv2_2653_3_67
Type: TC
Location: 75262 - 76764 (-)
Type: TC
Location: 75262 - 76764 (-)
Gene ID: HRGMv2_2653_3_68
Type: CAZyme
Location: 76845 - 77702 (+)
Type: CAZyme
Location: 76845 - 77702 (+)
Gene ID: HRGMv2_2653_3_69
Type:
Location: 77823 - 78101 (+)
Type:
Location: 77823 - 78101 (+)
Gene ID: HRGMv2_2653_3_70
Type: STP
Location: 78686 - 79633 (-)
Type: STP
Location: 78686 - 79633 (-)
Gene ID: HRGMv2_2653_3_71
Type: TC
Location: 79733 - 81196 (+)
Type: TC
Location: 79733 - 81196 (+)
Gene ID: HRGMv2_2653_3_72
Type: TC
Location: 81205 - 82218 (+)
Type: TC
Location: 81205 - 82218 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900545705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.