Cluster: HRGMv2_2653_CGC36
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2653
- CGC Family ID: CGCFAM_03235
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2653_22 | HRGMv2_2653_22_12 | 14072 | 15664 | - | GH10 |
| TC | HRGMv2_2653_22 | HRGMv2_2653_22_13 | 16017 | 17063 | - | 3.A.1.11.7 |
| TC | HRGMv2_2653_22 | HRGMv2_2653_22_14 | 17083 | 17856 | - | 3.A.1.11.1 |
| TC | HRGMv2_2653_22 | HRGMv2_2653_22_15 | 17853 | 18776 | - | 3.A.1.11.1 |
| TC | HRGMv2_2653_22 | HRGMv2_2653_22_16 | 18787 | 19893 | - | 3.A.1.11.2 |
Gene ID: HRGMv2_2653_22_12
Type: CAZyme
Location: 14072 - 15664 (-)
Type: CAZyme
Location: 14072 - 15664 (-)
Gene ID: HRGMv2_2653_22_13
Type: TC
Location: 16017 - 17063 (-)
Type: TC
Location: 16017 - 17063 (-)
Gene ID: HRGMv2_2653_22_14
Type: TC
Location: 17083 - 17856 (-)
Type: TC
Location: 17083 - 17856 (-)
Gene ID: HRGMv2_2653_22_15
Type: TC
Location: 17853 - 18776 (-)
Type: TC
Location: 17853 - 18776 (-)
Gene ID: HRGMv2_2653_22_16
Type: TC
Location: 18787 - 19893 (-)
Type: TC
Location: 18787 - 19893 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900545705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.