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Cluster: HRGMv2_2653_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2653_2 HRGMv2_2653_2_44 39419 40114 + 3.A.1.122.2
TC HRGMv2_2653_2 HRGMv2_2653_2_45 40111 41466 + 3.A.1.122.2
TC HRGMv2_2653_2 HRGMv2_2653_2_46 41477 42976 + 1.B.17.3.8
STP HRGMv2_2653_2 HRGMv2_2653_2_47 42991 43560 + SIS
CAZyme HRGMv2_2653_2 HRGMv2_2653_2_48 43557 44543 + GT9
pfam HRGMv2_2653_2 HRGMv2_2653_2_49 44548 45051 - Hydrolase | PNK3P | Hydrolase_like | HAD_2
STP HRGMv2_2653_2 HRGMv2_2653_2_50 45048 46517 - PfkB
CAZyme HRGMv2_2653_2 HRGMv2_2653_2_51 46606 47664 + GT4
pfam HRGMv2_2653_2 HRGMv2_2653_2_52 47733 48896 + Epimerase_2
CAZyme HRGMv2_2653_2 HRGMv2_2653_2_53 48887 50035 + GT4
NULL(UNKNOWN) HRGMv2_2653_2 HRGMv2_2653_2_54 50072 51331 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2653_2 HRGMv2_2653_2_55 51343 52332 - 9.B.97.6.2
TC HRGMv2_2653_2 HRGMv2_2653_2_56 52334 53581 - 2.A.66.2.10
Gene ID: HRGMv2_2653_2_44
Type: TC
Location: 39419 - 40114 (+)
Gene ID: HRGMv2_2653_2_45
Type: TC
Location: 40111 - 41466 (+)
Gene ID: HRGMv2_2653_2_46
Type: TC
Location: 41477 - 42976 (+)
Gene ID: HRGMv2_2653_2_47
Type: STP
Location: 42991 - 43560 (+)
Gene ID: HRGMv2_2653_2_48
Type: CAZyme
Location: 43557 - 44543 (+)
Gene ID: HRGMv2_2653_2_49
Type: pfam
Location: 44548 - 45051 (-)
Gene ID: HRGMv2_2653_2_50
Type: STP
Location: 45048 - 46517 (-)
Gene ID: HRGMv2_2653_2_51
Type: CAZyme
Location: 46606 - 47664 (+)
Gene ID: HRGMv2_2653_2_52
Type: pfam
Location: 47733 - 48896 (+)
Gene ID: HRGMv2_2653_2_53
Type: CAZyme
Location: 48887 - 50035 (+)
Gene ID: HRGMv2_2653_2_54
Type:
Location: 50072 - 51331 (+)
Gene ID: HRGMv2_2653_2_55
Type: TC
Location: 51343 - 52332 (-)
Gene ID: HRGMv2_2653_2_56
Type: TC
Location: 52334 - 53581 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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