Cluster: HRGMv2_2653_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2653
- CGC Family ID: CGCFAM_04634
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2653_2 | HRGMv2_2653_2_210 | 249573 | 250967 | + | GH28 |
| NULL(UNKNOWN) | HRGMv2_2653_2 | HRGMv2_2653_2_211 | 251017 | 253296 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2653_2 | HRGMv2_2653_2_212 | 253558 | 254562 | + | 2.A.28.3.4 |
| NULL(UNKNOWN) | HRGMv2_2653_2 | HRGMv2_2653_2_213 | 254948 | 256573 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2653_2 | HRGMv2_2653_2_214 | 256709 | 258178 | + | GH43_24 |
Gene ID: HRGMv2_2653_2_210
Type: CAZyme
Location: 249573 - 250967 (+)
Type: CAZyme
Location: 249573 - 250967 (+)
Gene ID: HRGMv2_2653_2_211
Type:
Location: 251017 - 253296 (+)
Type:
Location: 251017 - 253296 (+)
Gene ID: HRGMv2_2653_2_212
Type: TC
Location: 253558 - 254562 (+)
Type: TC
Location: 253558 - 254562 (+)
Gene ID: HRGMv2_2653_2_213
Type:
Location: 254948 - 256573 (+)
Type:
Location: 254948 - 256573 (+)
Gene ID: HRGMv2_2653_2_214
Type: CAZyme
Location: 256709 - 258178 (+)
Type: CAZyme
Location: 256709 - 258178 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Opitutales
Family
CAG-312
Genus
Merdousia
Species
Merdousia sp900545705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.