Genome Details
Selected Rep_genome_ID: HRGMv2_2393
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnoclostridium_A
Species
Lachnoclostridium_A sp002160755
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2393 | 3,398,965 | 94.91% | 0.345% | Japan | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2393_CGC2 | CGCFAM_00020 | Yes | 6 | 1 | host glycan/beta-glucan |
| HRGMv2_2393_CGC7 | CGCFAM_00064 | Yes | 7 | 2 | |
| HRGMv2_2393_CGC20 | CGCFAM_00073 | Yes | 7 | 4 | |
| HRGMv2_2393_CGC5 | CGCFAM_00149 | Yes | 10 | 2 | |
| HRGMv2_2393_CGC25 | CGCFAM_00179 | Yes | 4 | 1 | |
| HRGMv2_2393_CGC19 | CGCFAM_00342 | Yes | 7 | 2 | |
| HRGMv2_2393_CGC13 | CGCFAM_01033 | Yes | 8 | 1 | |
| HRGMv2_2393_CGC16 | CGCFAM_02448 | Yes | 8 | 3 | |
| HRGMv2_2393_CGC6 | CGCFAM_03809 | Yes | 6 | 1 | |
| HRGMv2_2393_CGC9 | CGCFAM_04932 | Yes | 6 | 1 |
Top CAZyme Families